Training materials
Resource type: hands-on tutorial
and Contributors: Erasmus+ Programme or Felix Almonte or James Johnson or Kaivan Kamali or Luigi Grassi or Michael Krone or Prof. Tom Freeman or Sonika Tyagi or The Carpentries
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hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
hands-on tutorial
Live Coding is a Skill
• beginnerTeaching and Hosting Galaxy training -
hands-on tutorial
Refining Genome Annotations with Apollo (eukaryotes)
•• intermediateGenome Annotation apollo2 cyoa eukaryote gmod jbrowse1 -
hands-on tutorial
Genomic Data Visualisation with JBrowse
• beginnerVisualisation gmod jbrowse1 -
hands-on tutorial
Refining Genome Annotations with Apollo (prokaryotes)
•• intermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
hands-on tutorial
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
hands-on tutorial
RNA Seq Counts to Viz in R
• beginnerTranscriptomics interactive-tools -
hands-on tutorial
Introduction to Machine Learning using R
•• intermediateStatistics and probability Statistics and machine learning interactive-tools -
hands-on tutorial
Image classification in Galaxy with fruit 360 dataset
• beginnerStatistics and probability Statistics and machine learning