Training materials
Target audience: Students or Trainers
and Contributors: Emily Angiolini or Manimozhiyan Arumugam or Matthias Fahrner or Prof. Marc Streit or Prof. Tom Freeman or Saskia Hiltemann or Timothy J. Griffin
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hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
hands-on tutorial
Hands-on for 'Trio Analysis using Synthetic Datasets from RD-Connect GPAP' tutorial
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hands-on tutorial
Hands-on for 'Genomic Data Visualisation with JBrowse' tutorial
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hands-on tutorial
Visualisation with Circos
• beginnerVisualisation -
hands-on tutorial
Hands-on for 'Genome Assembly of MRSA using Oxford Nanopore MinION Data' tutorial
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hands-on tutorial
Hands-on for 'Genome Assembly of MRSA using Illumina MiSeq Data' tutorial
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hands-on tutorial
De Bruijn Graph Assembly
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'metaQuantome 3: Taxonomy' tutorial
•• intermediateproteomics microbiome -
hands-on tutorial
Hands-on for 'MaxQuant and MSstats for the analysis of TMT data' tutorial
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hands-on tutorial
Hands-on for 'Proteogenomics 1: Database Creation' tutorial
•• intermediateproteomics proteogenomics