Training materials
Contributors: Eija Korpelainen or Eva Freyhult or Martin Strauch or Michael Ball or Mihaela Martis or Prof. Maya Topf or Stéphanie Robin or Vicky Schneider
-
ekorpela/cloud-vm-workshop
-
hands-on tutorial
Genome Assembly Quality Control
•• intermediateSequence assembly Assembly assembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
hands-on tutorial
Genome annotation with Funannotate
•• intermediateGenome Annotation eukaryote gmod jbrowse1 -
hands-on tutorial
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
slides
Quality Control
• beginnerSequence analysis -
Slides, course materials
Introduction to using cloud and containers for training - OpenStack and Docker oriented view
- 1
- 2