Training materials
Difficulty level: Beginner or Intermediate
and Contributors: Eija Korpelainen or Emily Angiolini or Erik van Nimwegen or Matthias Fahrner or Ms. Sejal Modha or Prof. Tom Freeman or Susan Coort
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e-learning
ISMARA: A tool to infer genome-wide regulatory interactions
• beginnerSystems biology Gene regulation Transcription factors and regulatory sites Computational modelling -
hands-on tutorial
Hands-on for 'Library Generation for DIA Analysis' tutorial
•• intermediateproteomics DIA -
hands-on tutorial
Hands-on for 'DIA Analysis using OpenSwathWorkflow' tutorial
•• intermediateproteomics DIA -
hands-on tutorial
Hands-on for 'Statistical analysis of DIA data' tutorial
•• intermediateproteomics DIA -
hands-on tutorial
Hands-on for 'MaxQuant and MSstats for the analysis of label-free data' tutorial
•• intermediateproteomics label-free -
hands-on tutorial
Hands-on for 'Label-free data analysis using MaxQuant' tutorial
• beginnerproteomics DDA label-free -
A network biology workflow to study transcriptomics data of the diabetic liver
• beginnerBiological networks Network Visualization -
course materials
Single-cell RNA-seq data analysis with R 2022
•• intermediateRNA-Seq RNA-Seq Single Cell technologies scRNA-seq -
course materials, Video
Single cell RNA-seq data analysis with Chipster
• beginnerRNA-Seq RNA-Seq Single Cell technologies scRNA-seq -
course materials, Video
Virus detection using small RNA-seq
• beginnerRNA-Seq
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