Training materials
Contributors: Dr. Sean I O’Donoghue or Erwan Corre or Frederik Coppens or Jamie Edwards or Joachim Wolff or Michael Krone or Prof. Tom Freeman
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hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Hi-C analysis of Drosophila melanogaster cells using HiCExplorer' tutorial
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hands-on tutorial
Hands-on for 'DNA Methylation data analysis' tutorial
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hands-on tutorial
Hands-on for 'Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)' tutorial
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hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateassembly pacbio -
hands-on tutorial
Hands-on for 'De novo transcriptome assembly, annotation, and differential expression analysis' tutorial
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slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
hands-on tutorial
Mapping
• beginnerSequence analysis Mapping
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