Training materials
Contributors: Dr. A.J. Pretorius or Eija Korpelainen or Luigi Grassi or Maria Doyle or Mehmet Tekman or Michael Krone or Prof. Tom Freeman or Susan Coort
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hands-on tutorial
Hands-on for 'Reference-based RNA-Seq data analysis' tutorial
• beginnertranscriptomics bulk rna-seq collections drosophila QC cyoa -
slides
Slides for 'Introduction to CRISPR screen analysis' tutorial
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hands-on tutorial
Hands-on for 'Understanding Barcodes' tutorial
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slides
Slides for 'Plates, Batches, and Barcodes' tutorial
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slides
Slides for 'Clustering 3K PBMCs with Scanpy' tutorial
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slides
Slides for 'Dealing with Cross-Contamination in Fixed Barcode Protocols' tutorial
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slides
An introduction to scRNA-seq data analysis
•• intermediateTranscriptomics Single Cell -
slides
Slides for 'Getting data into Galaxy' tutorial
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hands-on tutorial
Quality Control
• beginnerSequence analysis -
Slides, course materials
Introduction to using cloud and containers for training - OpenStack and Docker oriented view