Training materials
Contributors: Daniel Sobral or Dr. Sean I O’Donoghue or Eija Korpelainen or Emily Angiolini or James Johnson or Nicola Mulder or Prof. Tom Freeman or Roland Krause
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ekorpela/cloud-vm-workshop
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hands-on tutorial
Hands-on for 'Proteogenomics 1: Database Creation' tutorial
•• intermediateProteomics proteomics proteogenomics -
hands-on tutorial
Hands-on for 'Proteogenomics 2: Database Search' tutorial
•• intermediateProteomics proteomics proteogenomics -
hands-on tutorial
Hands-on for 'Proteogenomics 3: Novel peptide analysis' tutorial
•• intermediateProteomics proteomics proteogenomics -
hands-on tutorial
Hands-on for 'EncyclopeDIA' tutorial
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hands-on tutorial
Hands-on for 'Metaproteomics tutorial' tutorial
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Presentation
Data publishing and archival
• beginnerData publishing data archiving Data preserving -
Presentation
Practicalities of data handling
• beginnerData security Data acquisition Data management Data handling data encryption data protection setup checksums Data transfer Data storage data organisation -
Documentation, Exercise, Handout, Scripts
ADER19F - Analysis of Differential Expression with RNAseq (First course in 2019)
•• intermediateRNA-Seq Genomics RNA -
Documentation, Exercise, Handout, Scripts
ELB19F - Entry level Bioinformatics (First course in 2019)
• beginnerBioinformatics Sequencing