Training materials
Contributors: Daniel Blankenberg or Dr. Roland Schwarz or John "Scooter" Morris or Martin Čech or Matthias Fahrner or Patricia Palagi or Ray Sajulga
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hands-on tutorial
Galaxy Webhooks
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Pre-processing of 10X Single-Cell RNA Datasets
• beginnerTranscriptomics 10x Single Cell -
hands-on tutorial
Hands-on for 'PAPAA PI3K_OG: PanCancer Aberrant Pathway Activity Analysis' tutorial
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hands-on tutorial
Text-mining with the SimText toolset
• beginnerStatistics and probability Statistics and machine learning interactive-tools -
hands-on tutorial
MaxQuant and MSstats for the analysis of TMT data
• beginnerProteomics DDA TMT -
hands-on tutorial
Proteogenomics 1: Database Creation
•• intermediateProteomics proteogenomics -
hands-on tutorial
Proteogenomics 2: Database Search
•• intermediateProteomics proteogenomics -
hands-on tutorial
Peptide Library Data Analysis
•• intermediateProteomics -
hands-on tutorial
Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
••• advancedProteomics DDA SILAC -
hands-on tutorial
Library Generation for DIA Analysis
•• intermediateProteomics DIA