Training materials
Difficulty level: Beginner
and Contributors: Cristóbal Gallardo or Juha Tornroos or Prof. Tom Freeman or Stian Soiland-Reyes
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hands-on tutorial
Visualisation with Circos
• beginnerVisualisation -
hands-on tutorial
Analysis of plant scRNA-Seq Data with Scanpy
• beginnerTranscriptomics Single Cell paper-replication plants -
hands-on tutorial
Understanding Galaxy history system
• beginnerUsing Galaxy and Managing your Data -
hands-on tutorial
Introduction to Genomics and Galaxy
• beginnerIntroduction to Galaxy Analyses -
slides
Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads
• beginnerSequence assembly Assembly covid19 -
slides
Mapping
• beginnerSequence analysis -
Carpentries style curriculum
Introduction to Workflows with Common Workflow Language
• beginnerWorkflows RNA-Seq analysis cwl commonwl sciworkflows workflows -
Jupyter notebook
BioExcel Building Blocks (BioBB) Training Material
• beginnermolecular dynamics Docking Modeling life sciences -
Video, Manual, Slides, Installation instructions
How to install and deploy Beacon
• beginnerGenomics genomics open access eLearning EeLP