Training materials
Contributors: Christopher Barnett or Erik Hjerde or Marek Vrbacky or Markus Englund or Michael Ball or Michael Krone or Prof. Frederic Fol Leymarie or Prof. Tom Freeman or Wolfgang Maier or Yvan Le Bras
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hands-on tutorial
Ecoregionalization workflow tutorial
• beginnerEcology EBV workflow earth-system ecology gbif interactive-tools modeling ocean taxonomic data -
hands-on tutorial
Creating FAIR Quality assessment reports and draft of Data Papers from EML metadata with MetaShRIMPS
• beginnerEcology Data Paper EML FAIR Metadata -
hands-on tutorial
Creating metadata using Ecological Metadata Language (EML) standard with EML Assembly Line functionalities
• beginnerEcology Biodiversity Data Paper EML FAIR Metadata -
hands-on tutorial
Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition
• beginnerMetagenomics Microbial ecology Public health and epidemiology Taxonomy Sequence assembly Pathology Sequence analysis Heatmap Microbiome Nanopore data analysis Pathogens detection Phylogenetic tree cyoa microgalaxy -
lessons, e-learning
Introduction to Data Management Practices - Data Management Plans
• beginnerData management FAIR data Open science CONVERGE Data Stewardship Wizard Data management plan -
lessons, e-learning
Introduction to Data Management Practices - Versioning of data and code using Git
• beginnerData management FAIR data Software engineering RStudio CONVERGE README -
lessons, e-learning
Introduction to Data Management Practices - Cleaning tabular data with OpenRefine
• beginnerData management Open science FAIR data FAIR CONVERGE -
lessons, e-learning
Introduction to Data Management Practices - Data publication
• beginnerData management Open science FAIR data FAIR CONVERGE -
lessons, e-learning
Introduction to Data Management Practices - Metadata
• beginnerData management FAIR data data organisation FAIR CONVERGE ontologies metadata Controlled vocabularies -
lessons, e-learning
Introduction to Data Management Practices - Data organisation practices
• beginnerData management FAIR data data organisation FAIR CONVERGE