Training materials
Contributors: Chris Evelo or Dave Clements or Dr. Stephen David Laycock or Emily Angiolini or Espen Aberg or Nicola Mulder or Prof. Tom Freeman or Stéphanie Robin
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hands-on tutorial
Genome Assembly Quality Control
•• intermediateSequence assembly Assembly assembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
hands-on tutorial
Genome annotation with Funannotate
•• intermediateGenome Annotation eukaryote gmod jbrowse1 -
hands-on tutorial
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
hands-on tutorial
Hands-on for '16S Microbial Analysis with mothur (extended)' tutorial
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hands-on tutorial
Hands-on for '16S Microbial Analysis with mothur (short)' tutorial
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hands-on tutorial
Extracting Workflows from Histories
• beginnerUsing Galaxy and Managing your Data workflows -
hands-on tutorial
Introduction to Genomics and Galaxy
• beginnerIntroduction to Galaxy Analyses -
hands-on tutorial
NGS data logistics
• beginnerIntroduction to Galaxy Analyses