Training materials
Scientific topics: Assembly or Mathematics or MicroRNA sequencing
and Contributors: Chris Evelo or Collins Assisi or Emily Angiolini or Helena Rasche or NBIS - National Bioinformatics Infrastructure S... or Prof. Tom Freeman
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NBISweden/workshop-spatial
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NBISweden/single-cell_sib_scilifelab_2021
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NBISweden/workshop-RNAseq
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NBISweden/workshop-scRNAseq
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NBISweden/excelerate-scRNAseq
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hands-on tutorial
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial Resistance Assembly amr assembly gmod jbrowse1 microgalaxy nanopore -
hands-on tutorial
Making sense of a newly assembled genome
• beginnerSequence assembly Genomics Microbiology Assembly gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy -
hands-on tutorial
De Bruijn Graph Assembly
• beginnerSequence assembly Assembly -
Notes, Scripts
MATHEMATICS BOOT CAMP: Introduction to Complex Systems Tools