Training materials
Keywords: FastQC or paper-replication
and Contributors: Charlotte Soneson or Collins Assisi or Joan Hérisson or Mehmet Tekman or Munazah Andrabi or posit-conf-2023
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hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
Video
RDMbites: Sequencing data
•• intermediatetranscriptomics FASTQ FastQC Sequencing -
hands-on tutorial
Analysis of plant scRNA-Seq Data with Scanpy
• beginnerTranscriptomics Single Cell paper-replication plants