Training materials
Difficulty level: Beginner
and Target audience: Students
and Contributors: Celia van Gelder or Cristóbal Gallardo or Jason Williams or Michael Krone or Pavel Dvorak or Prof. Tom Freeman or Simon Gladman or Sonika Tyagi or The Gulbenkian Training Programme in Bioinforma...
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hands-on tutorial
Microbial Variant Calling
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Visualisation with Circos
• beginnerVisualisation -
hands-on tutorial
Genome annotation with Prokka
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
hands-on tutorial
An Introduction to Genome Assembly
• beginnerSequence assembly Assembly -
hands-on tutorial
De Bruijn Graph Assembly
• beginnerSequence assembly Assembly -
hands-on tutorial
Analysis of plant scRNA-Seq Data with Scanpy
• beginnerTranscriptomics Single Cell paper-replication plants -
hands-on tutorial
Downloading and Deleting Data in Galaxy
• beginnerUsing Galaxy and Managing your Data -
hands-on tutorial
Understanding Galaxy history system
• beginnerUsing Galaxy and Managing your Data -
hands-on tutorial
Introduction to Genomics and Galaxy
• beginnerIntroduction to Galaxy Analyses
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