Training materials
Contributors: CRUK CI Bioinformatics Core or Erwan Corre or Joachim Wolff or Julien Seiler or Lucille Delisle or Mehmet Tekman or Mikko Rautiainen or Sergio Martínez Cuesta or Timothy J. Griffin
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hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Clinical-MP-3-Verification
• beginnerProteomics label-TMT11 -
hands-on tutorial
Clinical-MP-4-Quantitation
• beginnerProteomics label-TMT11 -
hands-on tutorial
Clinical-MP-5-Data Interpretation
• beginnerProteomics label-TMT11 -
hands-on tutorial
Clinical-MP-2-Discovery
• beginnerProteomics label-TMT11 -
hands-on tutorial
Clinical-MP-1-Database-Generation
• beginnerProteomics label-TMT11 -
hands-on tutorial
CUT&RUN data analysis
• beginnerEpigenomics Epigenetics -
bioinformatics-core-shared-training/nextflow_september_2021
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bioinformatics-core-shared-training/Bulk_RNASeq_Course_Nov21