Training materials
Contributors: Brane Leskosek or Coline Royaux or Fotis E. Psomopoulos or Mehmet Tekman or Michael Ball or Patricia Palagi or Pratik Jagtap or Prof. Marc Streit or bioinformatics.ca
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hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Clinical-MP-3-Verification
• beginnerProteomics label-TMT11 -
hands-on tutorial
Clinical-MP-4-Quantitation
• beginnerProteomics label-TMT11 -
hands-on tutorial
Clinical-MP-5-Data Interpretation
• beginnerProteomics label-TMT11 -
hands-on tutorial
Clinical-MP-2-Discovery
• beginnerProteomics label-TMT11 -
hands-on tutorial
Clinical-MP-1-Database-Generation
• beginnerProteomics label-TMT11 -
hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
bioinformaticsdotca/BMB_2024
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bioinformaticsdotca/AMB_2024