Training materials
Difficulty level: Intermediate
and Contributors: Björn Grüning or Celia van Gelder or Daniel Faria or Jayadev Joshi or Kenneth Hoste or Koen Van den Berge or Manimozhiyan Arumugam or Marek Vrbacky or Ms. Yo Yehudi or Nils Peder Willassen or Pip Griffin or Prof. Richard Baldock
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hands-on tutorial
Pathway analysis with the MINERVA Platform
•• intermediateTranscriptomics bulk cyoa rna-seq viz -
hands-on tutorial
AlphaFold and friends on the HPC
•• intermediateProtein structure analysis Machine learning Structure prediction AlphaFold Database (13181) -
Slideshow, Training materials
Prediction of protein structures and complexes with AlphaFold on the HPC
•• intermediateProtein structure analysis Machine learning Structure prediction Structure visualisation Multiple sequence alignment AlphaFold Database (13181) -
hands-on tutorial
Secretome Prediction
•• intermediateProteomics human work-in-progress -
hands-on tutorial
Peptide Library Data Analysis
•• intermediateProteomics -
hands-on tutorial
Machine Learning Modeling of Anticancer Peptides
•• intermediateProteomics ML cancer -
hands-on tutorial
Detection and quantitation of N-termini (degradomics) via N-TAILS
•• intermediateProteomics -
Documentation, Exercise, Handout, Scripts
ADER19F - Analysis of Differential Expression with RNAseq (First course in 2019)
•• intermediateRNA-Seq Genomics RNA -
Documentation, Exercise, Handout, Scripts
ADER18S - Analysis of Differential Expression with RNAseq (Second course in 2018)
•• intermediateRNA-Seq Genomics RNA -
Documentation, Exercise, Handout, Scripts
ADER18F - Analysis of Differential Expression with RNAseq (First course in 2018)
•• intermediateRNA-Seq Genomics RNA
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