Training materials
Scientific topics: Genomics
and Contributors: Björn Grüning or Canadian Bioinformatics Workshops or Celia van Gelder or Dr. Konstantinos Sidiropoulos or Dr. Martin Graham or Gary Saunders or Manimozhiyan Arumugam or Marek Vrbacky or Melbourne Bioinformatics or Ms. Yo Yehudi or NBIS - National Bioinformatics Infrastructure S... or Nils Peder Willassen or Saskia Hiltemann
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hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
bioinformatics-ca/EPI_2021
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bioinformatics-ca/CAN_2021
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NBISweden/workshop-pgip
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bioinformatics-ca/HTG_2021
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NBISweden/workshop-ngsintro
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NBISweden/workshop-epigenomics-RTDs
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melbournebioinformatics/MelBioInf_docs
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hands-on tutorial
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial Resistance Assembly amr assembly gmod jbrowse1 microgalaxy nanopore -
hands-on tutorial
Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy
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