Training materials
Scientific topics: Mapping or Quantitative proteomics
and Contributors: Biocore@CRG or Björn Grüning or Celia van Gelder or Jalview Coordinator or Joachim Wolff or Manimozhiyan Arumugam or Marek Suchanek or Marek Vrbacky or Martin Strauch or Matthias Fahrner or Ms. Yo Yehudi or Nils Peder Willassen
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hands-on tutorial
MaxQuant and MSstats for the analysis of TMT data
• beginnerProteomics DDA TMT -
hands-on tutorial
Secretome Prediction
•• intermediateProteomics human work-in-progress -
hands-on tutorial
Label-free versus Labelled - How to Choose Your Quantitation Method
• beginnerProteomics DDA -
hands-on tutorial
Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
••• advancedProteomics DDA SILAC -
hands-on tutorial
Peptide and Protein ID using SearchGUI and PeptideShaker
• beginnerProteomics DDA HeLa -
hands-on tutorial
Library Generation for DIA Analysis
•• intermediateProteomics DIA -
hands-on tutorial
DIA Analysis using OpenSwathWorkflow
•• intermediateProteomics DIA -
hands-on tutorial
Statistical analysis of DIA data
•• intermediateProteomics DIA -
hands-on tutorial
Detection and quantitation of N-termini (degradomics) via N-TAILS
•• intermediateProteomics -
hands-on tutorial
Label-free data analysis using MaxQuant
• beginnerProteomics DDA label-free
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