Training materials
Difficulty level: Beginner
and Contributors: Bilal Shaikh or Daniel Thomas Lopez or Emily Angiolini or Jyoti Khadake or Prof. Tom Freeman or Roland Krause or Subina Mehta
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Online material, Recording, hands-on tutorial
MaBoSS: a tool for modelling biological systems
• beginnerMathematical modelling cancer Signalling boolean modelling logical modelling -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data (short)' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
Presentation
Data publishing and archival
• beginnerData publishing data archiving Data preserving -
Presentation
Practicalities of data handling
• beginnerData security Data acquisition Data management Data handling data encryption data protection setup checksums Data transfer Data storage data organisation -
Tutorial, Documentation
runBioSimulations tutorial and help
• beginnerSystems biology Computational biology Simulation experiment Modelling and simulation biosimulators COMBINE OMEX SED-ML Modeling dynamic simulations SBML BNGL -
Presentation
Introduction to FAIR principles
• beginnerFAIR data -
Train the trainer
• beginnerComputational biology Bioinformatics training pedagogy