Training materials
Contributors: Beatriz Serrano-Solano or Emily Angiolini or Frederick Carver or Helena Rasche or Markus Englund or Pratik Jagtap or Prof. Frederic Fol Leymarie or Prof. Tom Freeman or Sabine Österle or Sonika Tyagi
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hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
hands-on tutorial
Screening assembled genomes for contamination using NCBI FCS
• beginnerSequence analysis -
hands-on tutorial
CUT&RUN data analysis
• beginnerEpigenomics Epigenetics -
slides
Friends Don't Let Friends Make Bad Graphs
• beginnerVisualisation -
slides
Galaxy and Celery
• beginnerGalaxy Server administration -
hands-on tutorial
FAIR Galaxy Training Material
• beginnerFAIR Galaxy Training material -
hands-on tutorial
FAIR data management solutions
•• intermediateFAIR Data management -
lessons, e-learning
Introduction to Data Management Practices - Data Management Plans
• beginnerData management FAIR data Open science CONVERGE Data Stewardship Wizard Data management plan -
lessons, e-learning
Introduction to Data Management Practices - Versioning of data and code using Git
• beginnerData management FAIR data Software engineering RStudio CONVERGE README -
lessons, e-learning
Introduction to Data Management Practices - Cleaning tabular data with OpenRefine
• beginnerData management Open science FAIR data FAIR CONVERGE