Training materials
Difficulty level: Beginner
and Scientific topics: Bioinformatics or Data management
and Contributors: Bang Wong or Björn Grüning or Celia van Gelder or Emily Angiolini or Gautier Sarah or Geert Bonamie or James Chong or Jyoti Khadake or Nene Barry or Software Sustainability Institute
-
course materials, Online material, Training materials
Cloud-SPAN Genomics
• beginnerBioinformatics Software engineering Genomics DNA polymorphism Workflows Data architecture, analysis and design Shell Command line Cloud computing HPC Data analysis High performance computing -
course materials, online course, Training materials
Cloud-SPAN Prenomics
• beginnerBioinformatics Software engineering Genomics Query and retrieval Data handling Cloud computing Shell Command line Amazon Web Services genomics HPC Data analysis bioinformatics -
Slides
FAIR data - Module 4 (share and publish data)
• beginnerBioinformatics Biology Data management data sharing Data publishing legal framework data warehouse licensing data reuse -
Slides
FAIR data - Module 3 (Metadata)
• beginnerBioinformatics Biology Data management Data handling metadata data annotation life science standards data sharing -
Presentation
Practicalities of data handling
• beginnerData security Data acquisition Data management Data handling data encryption data protection setup checksums Data transfer Data storage data organisation -
e-learning
Data Management and Writing a Data Management Plan
• beginnerData management -
Train the trainer
• beginnerComputational biology Bioinformatics training pedagogy