Training materials
Difficulty level: Beginner or Intermediate
and Contributors: Bang Wong or Bérénice Batut or Jamie Edwards or Manimozhiyan Arumugam or Marek Vrbacky or Pedro Fernandes or Toby Hodges
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hands-on tutorial
Hands-on for 'Upload data to Galaxy' tutorial
• beginnerintroduction -
hands-on tutorial
Hands-on for 'Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data' tutorial
•• intermediateGenetic variation variant-analysis covid19 virology one-health -
hands-on tutorial
Hands-on for 'Reference-based RNA-Seq data analysis' tutorial
• beginnerTranscriptomics transcriptomics bulk rna-seq collections drosophila QC cyoa -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data (short)' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Hands-on for 'Advanced R in Galaxy' tutorial
•• intermediateSoftware engineering data-science R -
hands-on tutorial
Hands-on for 'From peaks to genes' tutorial
• beginnerintroduction -
hands-on tutorial
Hands-on for 'Quality Control' tutorial
• beginnerSequence analysis sequence-analysis -
Carpentries style curriculum
Introduction to Workflows with Common Workflow Language
• beginnerWorkflows RNA-Seq analysis cwl commonwl sciworkflows workflows -
Documentation, Exercise, Handout, Scripts
ELB19F - Entry level Bioinformatics (First course in 2019)
• beginnerBioinformatics Sequencing
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