Training materials
Scientific topics: Software engineering or Transcriptomics
and Contributors: Bérénice Batut or Emily Angiolini or Mateusz Kuzak or Prof. Tom Freeman or Saskia Hiltemann or Stephen Taylor
-
hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
hands-on tutorial
JavaScript plugins
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Generic plugins
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Data source integration
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
CLIP-Seq data analysis from pre-processing to motif detection
• beginnerTranscriptomics -
hands-on tutorial
Pre-processing of Single-Cell RNA Data
• beginnerTranscriptomics Single Cell -
hands-on tutorial
Hands-on for 'Clustering 3K PBMCs with Scanpy' tutorial
-
hands-on tutorial
Hands-on for 'Reference-based RNA-Seq data analysis' tutorial
• beginnertranscriptomics bulk rna-seq collections drosophila QC cyoa -
hands-on tutorial
Variant Calling Workflow
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
Version Control with Git
• beginnerSoftware engineering Foundations of Data Science
- 1
- 2