Training materials
Scientific topics: Sequence assembly
and Licence: Creative Commons Attribution 4.0 International
and Contributors: Bérénice Batut or Emily Angiolini or Fidel Ramirez or Mateusz Kuzak or Portada: Enrique Sahagún or Prof. Tom Freeman or Saskia Hiltemann or Stephen Taylor
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hands-on tutorial
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial Resistance Assembly amr assembly gmod jbrowse1 microgalaxy nanopore -
hands-on tutorial
Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy -
hands-on tutorial
De Bruijn Graph Assembly
• beginnerSequence assembly Assembly