Training materials
Difficulty level: Beginner
and Contributors: Bérénice Batut or Chris Evelo or Dr. Colin Combe or Jan Slifka or Michael Krone or Nene Barry or Prof. David Willaim Burt or Prof. Tom Freeman
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hands-on tutorial
Upload data to Galaxy
• beginnerIntroduction to Galaxy Analyses -
hands-on tutorial
Hands-on for 'Reference-based RNA-Seq data analysis' tutorial
• beginnertranscriptomics bulk rna-seq collections drosophila QC cyoa -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data (short)' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
From peaks to genes
• beginnerIntroduction to Galaxy Analyses -
hands-on tutorial
Mapping
• beginnerSequence analysis Mapping -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
Presentation
Data publishing and archival
• beginnerData publishing data archiving Data preserving -
Presentation
Practicalities of data handling
• beginnerData security Data acquisition Data management Data handling data encryption data protection setup checksums Data transfer Data storage data organisation -
A network biology workflow to study transcriptomics data of the diabetic liver
• beginnerBiological networks Network Visualization