Training materials
Contributors: Avans Hogeschool or Emily Angiolini or Gildas Le Corguillé or Niclas Jareborg or Nicola Soranzo or Prof. Marc Streit or Prof. Maya Topf or Prof. Tom Freeman or Roland Krause or Wolfgang Maier
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Training materials
ELITMa Module "Data Management Strategy" (Finland 28-29 June 2023)
• beginnerResearch Data Management RDM Strategy Training -
lessons, e-learning
Introduction to Data Management Practices - Data Management Plans
• beginnerData management FAIR data Open science CONVERGE Data Stewardship Wizard Data management plan -
lessons, e-learning
Introduction to Data Management Practices - Versioning of data and code using Git
• beginnerData management FAIR data Software engineering RStudio CONVERGE README -
lessons, e-learning
Introduction to Data Management Practices - Introduction to RStudio
• beginnerData management FAIR data RStudio CONVERGE README -
lessons, e-learning
Introduction to Data Management Practices - Scripted analysis with R
• beginnerData management FAIR data Bioinformatics Data visualisation RStudio CONVERGE ggPlot -
lessons, e-learning
Introduction to Data Management Practices - Cleaning tabular data with OpenRefine
• beginnerData management Open science FAIR data FAIR CONVERGE -
lessons, e-learning
Introduction to Data Management Practices - Data publication
• beginnerData management Open science FAIR data FAIR CONVERGE -
hands-on tutorial
Avian influenza viral strain analysis from gene segment sequencing data
•• intermediateGenetic variation Variant Analysis one-health virology -
hands-on tutorial
Somatic Variant Discovery from WES Data Using Control-FREEC
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
• beginnerGenetic variation Variant Analysis covid19 one-health virology