Training materials
Contributors: Armando Arredondo Soto or Björn Grüning or Dr. Simon Tomlinson or Erik Hedman or Lieven Clement or Lucille Delisle or Mikko Rautiainen
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hands-on tutorial
Label-free versus Labelled - How to Choose Your Quantitation Method
• beginnerProteomics DDA -
hands-on tutorial
Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
••• advancedProteomics DDA SILAC -
hands-on tutorial
Peptide and Protein ID using SearchGUI and PeptideShaker
• beginnerProteomics DDA HeLa -
hands-on tutorial
Detection and quantitation of N-termini (degradomics) via N-TAILS
•• intermediateProteomics -
hands-on tutorial
Peptide and Protein ID using OpenMS tools
••• advancedProteomics DDA HeLa -
hands-on tutorial
Protein FASTA Database Handling
• beginnerProteomics DDA -
hands-on tutorial
Enable upload via FTP
• beginnerGalaxy Server administration data git-gat -
hands-on tutorial
Galaxy Database schema
• beginnerGalaxy Server administration -
hands-on tutorial
Performant Uploads with TUS
• beginnerGalaxy Server administration -
hands-on tutorial
Connecting Galaxy to a compute cluster
• beginnerGalaxy Server administration ansible git-gat jobs