Training materials
Contributors: Anton Nekrutenko or David Philip Judge or Erasmus+ Programme or Gautier Sarah or John Chilton or Maria Doyle or Pratik Jagtap
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hands-on tutorial
Clinical Metaproteomics 3: Verification
• beginnerProteomics label-TMT11 -
hands-on tutorial
Clinical Metaproteomics 5: Data Interpretation
• beginnerProteomics label-TMT11 -
hands-on tutorial
Clinical Metaproteomics 4: Quantitation
• beginnerProteomics label-TMT11 -
hands-on tutorial
Clinical Metaproteiomics 1: Database-Generation
• beginnerProteomics label-TMT11 -
hands-on tutorial
Clinical Metaproteomics 2: Discovery
• beginnerProteomics label-TMT11 -
hands-on tutorial
Comparative gene analysis in unannotated genomes
• beginnerGenomics Gene and protein families Sequence analysis Phylogeny Genome Annotation annotation cookbook eukaryote evolution microgalaxy prokaryote vgp -
hands-on tutorial
Refining Genome Annotations with Apollo (eukaryotes)
•• intermediateGenome Annotation apollo2 cyoa eukaryote gmod jbrowse1 -
hands-on tutorial
Calling variants in non-diploid systems
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote -
hands-on tutorial
Calling very rare variants
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Calling variants in diploid systems
• beginnerGenetic variation Variant Analysis