Training materials
Licence: Creative Commons Attribution 4.0 International
and Contributors: Anthony Bretaudeau or CRUK CI Bioinformatics Core or Christopher Barnett or Daniel Faria or Dave Clements or Krzysztof Poterlowicz or Prof. Frederic Fol Leymarie
-
hands-on tutorial
Sequence data submission to ENA
• beginnerENA FAIR FAIR Data, Workflows, and Research -
hands-on tutorial
Making clinical datasets FAIR
•• intermediateFAIR clinical data -
bioinformatics-core-shared-training/Quantitative-ChIPseq-Workshop
-
bioinformatics-core-shared-training/cruk-summer-school-2020
-
hands-on tutorial
Somatic Variant Discovery from WES Data Using Control-FREEC
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Long non-coding RNAs (lncRNAs) annotation with FEELnc
•• intermediateGenome Annotation eukaryote -
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Refining Genome Annotations with Apollo (eukaryotes)
•• intermediateGenome Annotation apollo2 cyoa eukaryote gmod jbrowse1 -
hands-on tutorial
Genome annotation with Maker
••• advancedGenome Annotation eukaryote gmod jbrowse1 maker