Training materials
Contributors: Anne Pajon or Eija Korpelainen or Emily Angiolini or Erik Hjerde or Erwan Corre or Martin Hubalek or Prof. Tom Freeman or Vicky Schneider
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ekorpela/cloud-vm-workshop
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hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateassembly pacbio -
hands-on tutorial
Hands-on for 'De novo transcriptome assembly, annotation, and differential expression analysis' tutorial
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hands-on tutorial
Galaxy Basics for genomics
• beginnerIntroduction to Galaxy Analyses -
hands-on tutorial
From peaks to genes
• beginnerIntroduction to Galaxy Analyses -
slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
slides
Slides for 'Getting data into Galaxy' tutorial