Training materials
Contributors: Anna Syme or Emily Angiolini or Gildas Le Corguillé or Jalview Coordinator or Laura Leroi or Michael Krone or Nicola Mulder or Nicola Soranzo or Prof. Tom Freeman or Sonika Tyagi
-
hands-on tutorial
Hands-on for 'Large genome assembly and polishing' tutorial
-
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Microbial Variant Calling' tutorial
-
hands-on tutorial
Hands-on for 'Calling variants in diploid systems' tutorial
-
hands-on tutorial
Hands-on for 'Genome annotation with Prokka' tutorial
• beginnergenome-annotation prokaryote -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Chloroplast genome assembly' tutorial
-
hands-on tutorial
Hands-on for 'VGP assembly pipeline' tutorial
•• intermediateassembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateassembly pacbio