Training materials
Difficulty level: Beginner
and Contributors: Anna Syme or Dr. A.J. Pretorius or Dr. Manuel Corpas or Erwan Corre or Melanie Föll or Pavel Dvorak or Vicky Schneider
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slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Genome annotation with Prokka' tutorial
• beginnergenome-annotation prokaryote -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Label-free data analysis using MaxQuant' tutorial
• beginnerproteomics DDA label-free -
hands-on tutorial
Hands-on for 'Mass spectrometry imaging: Loading and exploring MSI data' tutorial
• beginnerproteomics mouse imaging -
hands-on tutorial
Mass spectrometry imaging: Examining the spatial distribution of analytes
• beginnerMetabolomics -
hands-on tutorial
How to reproduce published Galaxy analyses
• beginnerIntroduction to Galaxy Analyses -
hands-on tutorial
Hands-on for 'A short introduction to Galaxy' tutorial
• beginnerintroduction español -
slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
hands-on tutorial
Quality Control
• beginnerSequence analysis