Training materials
Keywords: ComputationalBiology or Mathematics or assembly
and Contributors: Anna Syme or Armin Fuchs or Emily Angiolini or Jamie Edwards or Prof. Michael J E Sternberg or Prof. Tom Freeman or Saskia Hiltemann
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hands-on tutorial
Large genome assembly and polishing
• beginnerSequence assembly Assembly assembly nanopore polishing -
hands-on tutorial
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial Resistance Assembly amr assembly gmod jbrowse1 microgalaxy nanopore -
hands-on tutorial
Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy -
hands-on tutorial
Hands-on for 'Antibiotic resistance detection' tutorial
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Notes, Scripts
MATHEMATICS BOOT CAMP: Introduction to Complex Systems Tools