Training materials
Difficulty level: Intermediate
and Contributors: Andrew Mason or Bazante Sanders or Daniel Faria or Erasmus+ Programme or Instituto Gulbenkian de Ciência or Martin Krzywinski
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hands-on tutorial
Python - Type annotations
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Python - Testing
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
Video
RDMbites: Sequencing data
•• intermediatetranscriptomics FASTQ FastQC Sequencing -
hands-on tutorial
Refining Genome Annotations with Apollo (eukaryotes)
•• intermediateGenome Annotation apollo2 cyoa eukaryote gmod jbrowse1 -
hands-on tutorial
Genomic Data Visualisation with JBrowse
•• intermediateVisualisation gmod jbrowse1 -
hands-on tutorial
Refining Genome Annotations with Apollo (prokaryotes)
•• intermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
hands-on tutorial
Introduction to Machine Learning using R
•• intermediateStatistics and probability Statistics and machine learning interactive-tools -
hands-on tutorial
CLI Educational Game - Bashcrawl
•• intermediateSoftware engineering Foundations of Data Science bash game jupyter-notebook -
hands-on tutorial
Python - Subprocess
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook