Training materials
Target audience: Students or bioinformaticians
and Contributors: Andrea Argentini or Dr. Roland Schwarz or Emily Angiolini or Erwan Corre or John "Scooter" Morris or Laurent Gatto or Lieven Clement or Martin Krzywinski or Mateusz Kuzak or Michael Krone or Patricia Palagi or Prof. Tom Freeman
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hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
hands-on tutorial
Genome annotation with Funannotate
•• intermediateGenome Annotation eukaryote gmod jbrowse1 -
hands-on tutorial
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
hands-on tutorial
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
slides
Quality Control
• beginnerSequence analysis -
course materials, Training materials, Slides
Implementation of Data Management Plans & Data Stewardship in practice