Training materials
Difficulty level: Beginner or Not specified
and Contributors: Andrea Argentini or Bazante Sanders or Biocore@CRG or Dr. Simon Andrews or Dr. Simon Tomlinson or Elin Kronander or John "Scooter" Morris or Marko Vidak or Martin Krzywinski or Mateusz Kuzak or Ms. Sejal Modha or Patricia Palagi or Prof. Tom Freeman
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hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
biocorecrg/CRG_RIntroduction_2021
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biocorecrg/CRG_R_tidyverse_2021
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biocorecrg/SIB_course_nextflow_Nov_2021
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biocorecrg/ELIXIR_containers_nextflow
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biocorecrg/RNAseq_course_2019
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biocorecrg/CoursesCRG_Containers_Nextflow_May_2022
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lessons, e-learning
Introduction to Data Management Practices - Data Management Plans
• beginnerData management FAIR data Open science CONVERGE Data Stewardship Wizard Data management plan -
lessons, e-learning
Introduction to Data Management Practices - Versioning of data and code using Git
• beginnerData management FAIR data Software engineering RStudio CONVERGE README -
lessons, e-learning
Introduction to Data Management Practices - Introduction to RStudio
• beginnerData management FAIR data RStudio CONVERGE README