Training materials
Scientific topics: Data structures
and Contributors: Andrea Argentini or Avans Hogeschool or Data Carpentry or Dr. Roland Schwarz or Dr. Ting Wang or John "Scooter" Morris or Martin Krzywinski or Patricia Palagi or Praveen Kumar or Prof. Tom Freeman or Yvonne Kallberg
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lessons, e-learning
Introduction to Data Management Practices - Versioning of data and code using Git
• beginnerData management FAIR data Software engineering RStudio CONVERGE README -
hands-on tutorial
SQL with Python
•• intermediateSoftware engineering Foundations of Data Science Python SQL jupyter-notebook -
hands-on tutorial
SQL with R
•• intermediateSoftware engineering Foundations of Data Science R SQL jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Make & Snakemake
•• intermediateSoftware engineering Foundations of Data Science -
hands-on tutorial
Advanced CLI in Galaxy
•• intermediateSoftware engineering Foundations of Data Science bash jupyter-notebook -
hands-on tutorial
CLI basics
• beginnerSoftware engineering Foundations of Data Science bash jupyter-notebook -
hands-on tutorial
Advanced SQL
• beginnerSoftware engineering Foundations of Data Science SQL jupyter-notebook -
hands-on tutorial
Introduction to SQL
• beginnerSoftware engineering Foundations of Data Science SQL jupyter-notebook -
hands-on tutorial
SQL Educational Game - Murder Mystery
•• intermediateSoftware engineering Foundations of Data Science SQL game jupyter-notebook -
hands-on tutorial
dplyr & tidyverse for data processing
••• advancedSoftware engineering Foundations of Data Science R jupyter-notebook rmarkdown-notebook