Training materials
Licence: Creative Commons Attribution 4.0 International
and Contributors: Andrea Argentini or Anup Kumar or Eija Korpelainen @eija, ekorpelainen@gmail.com or John Chilton or John Davis or Jure Dimec or Mateusz Kuzak or Matthias Fahrner or Mr. Andy Yates or Patricia Palagi or Prof. Tom Freeman or Stéphanie Robin
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hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
hands-on tutorial
Genome annotation with Funannotate
•• intermediateGenome Annotation eukaryote gmod jbrowse1 -
hands-on tutorial
Debugging Galaxy
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Contributing a New Feature to Galaxy Core
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Writing Automated Tests for Galaxy
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
hands-on tutorial
A Docker-based interactive Jupyterlab powered by GPU for artificial intelligence in Galaxy
• beginnerStatistics and probability Statistics and machine learning deep-learning image-segmentation interactive-tools jupyter-lab machine-learning protein-3D-structure -
hands-on tutorial
Regression in Machine Learning
• beginnerStatistics and probability Statistics and machine learning