Training materials
Contributors: Andrea Argentini or Anne Pajon or Daniel Sobral or Erwan Corre or Luigi Grassi or Martin Krzywinski or Mateusz Kuzak or Matthias Fahrner or Patricia Palagi or Prof. Frederic Fol Leymarie or Prof. Tom Freeman
-
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateassembly pacbio -
hands-on tutorial
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
hands-on tutorial
Hands-on for 'MaxQuant and MSstats for the analysis of TMT data' tutorial
-
hands-on tutorial
Hands-on for 'Peptide and Protein Quantification via Stable Isotope Labelling (SIL)' tutorial
••• advancedproteomics DDA SILAC -
hands-on tutorial
Hands-on for 'Library Generation for DIA Analysis' tutorial
•• intermediateproteomics DIA -
hands-on tutorial
Hands-on for 'DIA Analysis using OpenSwathWorkflow' tutorial
•• intermediateproteomics DIA -
hands-on tutorial
Hands-on for 'Statistical analysis of DIA data' tutorial
•• intermediateproteomics DIA