Training materials
Difficulty level: Beginner
and Contributors: Amos Bairoch or Clemens Blank or Diana Pilvar or Emily Angiolini or Jamie Edwards or Luigi Grassi or Prof. Tom Freeman or Sabine Österle
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lessons
Introduction to g:Profiler
• beginnerBioinformatics g:Profiler Enrichment analysis Enrichment -
Training materials
ELITMa Module "Data Management Strategy" (Finland 28-29 June 2023)
• beginnerResearch Data Management RDM Strategy Training -
Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
e-learning
Cellosaurus : A resource on cell lines
• beginnerBiosciences Experimental design and studies basic research Reproducibility cell line -
Video, E-Learning
How to create a concept for the SPHN Dataset
• beginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design Ontology Semantic inheritance SNOMED CT Conceptualization -
hands-on tutorial
Hands-on for 'Reference-based RNA-Seq data analysis' tutorial
• beginnertranscriptomics bulk rna-seq collections drosophila QC cyoa -
hands-on tutorial
Galaxy Basics for genomics
• beginnerIntroduction to Galaxy Analyses -
hands-on tutorial
From peaks to genes
• beginnerIntroduction to Galaxy Analyses -
Video, Training materials, E-learning
Training Primer (RDF and SPARQL)
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph Triplestore Ontology -
Video, Training materials, E-learning
Semantic Standards
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Data handling Standardisation and normalisation Clinical data Data semantics FAIR Standards Ontology SNOMED CT LOINC ATC CHOP ICD Interoperability
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