Training materials
Difficulty level: Beginner
and Target audience: Students
and Contributors: Amos Bairoch or Anna Syme or Björn Grüning or David Bouyssié or David Philip Judge or Elizabeth Sheets or Frédérique Lisacek
-
hands-on tutorial
Large genome assembly and polishing
• beginnerSequence assembly Assembly assembly nanopore polishing -
hands-on tutorial
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Microbial Variant Calling
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Genome annotation with Prokka
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Chloroplast genome assembly
• beginnerSequence assembly Assembly jbrowse1 nanopore plants -
hands-on tutorial
Label-free versus Labelled - How to Choose Your Quantitation Method
• beginnerProteomics DDA -
hands-on tutorial
Peptide and Protein ID using SearchGUI and PeptideShaker
• beginnerProteomics DDA HeLa -
hands-on tutorial
Protein FASTA Database Handling
• beginnerProteomics DDA -
hands-on tutorial
Mass spectrometry imaging: Loading and exploring MSI data
• beginnerProteomics imaging mouse -
hands-on tutorial
Understanding Galaxy history system
• beginnerUsing Galaxy and Managing your Data
- 1
- 2