Training materials
Difficulty level: Intermediate
and Contributors: Alvaro Gonzalez or Christophe Antoniewski or Célia Michotey or Donny Vrins or Erik Garrison or Lieven Clement or Stephan Nylinder
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hands-on tutorial
Python - Type annotations
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Python - Testing
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Python - Subprocess
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Python - Globbing
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Python - Argparse
•• intermediateSoftware engineering Foundations of Data Science -
hands-on tutorial
Make & Snakemake
•• intermediateSoftware engineering Foundations of Data Science -
PSLS22 Practical Statistics for the Life Sciences
•• intermediate -
Video
A common framework for designing portable federated pipelines
•• intermediateData architecture, analysis and design data access federated data analysis -
Documentation, Exercise, Handout, Scripts
CPANG19 - Computational PANGenomics (2019)
•• intermediateGenomics -
Documentation, Exercise, Handout, Scripts
PDA19 - Proteomics Data Analysis (2019)
•• intermediateProteomics Biological databases Mass spectrometry data
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