Training materials
Difficulty level: Intermediate
and Contributors: Alvaro Gonzalez or Brandon Pickett or Fotis E. Psomopoulos or Mikko Rautiainen or Simon Gladman or Thomas Denecker
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hands-on tutorial
Hands-on for 'M. tuberculosis Variant Analysis' tutorial
•• intermediatevariant-analysis prokaryote one-health -
hands-on tutorial
Hands-on for 'VGP assembly pipeline' tutorial
•• intermediateassembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'VGP assembly pipeline - short version' tutorial
•• intermediateassembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'Introduction to Machine Learning using R' tutorial
•• intermediatestatistics interactive-tools -
hands-on tutorial
Hands-on for 'Plotting in Python' tutorial
•• intermediatedata-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Advanced R in Galaxy' tutorial
•• intermediatedata-science R -
hands-on tutorial
Hands-on for 'Advanced Python' tutorial
•• intermediatedata-science jupyter-notebook -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly -
Video
A common framework for designing portable federated pipelines
•• intermediateData architecture, analysis and design data access federated data analysis -
Documentation, Exercise, Handout, Scripts
CPANG19 - Computational PANGenomics (2019)
•• intermediateGenomics
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