Training materials
Contributors: Allyson Lister or Alvaro Gonzalez or Anthony Bretaudeau or Brane Leskosek or Daniel Sobral or Hadley Wickham or Michael Parkin
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hands-on tutorial
RNA-Seq analysis with AskOmics Interactive Tool
• beginnerTranscriptomics -
hands-on tutorial
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
hands-on tutorial
Hands-on for 'Galaxy Interactive Tools' tutorial
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slides
Slides for 'Refining Genome Annotations with Apollo' tutorial
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slides
Prerequisites for building software/conda packages
• beginnerSoftware engineering Development in Galaxy -
slides
Tool Shed: sharing Galaxy tools
• beginnerSoftware engineering Development in Galaxy -
slides
Tool development and integration into Galaxy
• beginnerSoftware engineering Development in Galaxy -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly -
slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
slides
Integrate and query local datasets and distant RDF data with AskOmics using Semantic Web technologies
• beginnerTranscriptomics