Training materials
Licence: Creative Commons Attribution 4.0 International
and Keywords: assembly or monitoring
and Contributors: Allegra Via or Dr. Nils Gehlenborg or Emma Leith or Helena Rasche or John Chilton or Mark Beaumont
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hands-on tutorial
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial Resistance Assembly amr assembly gmod jbrowse1 microgalaxy nanopore -
hands-on tutorial
Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy -
hands-on tutorial
Galaxy Monitoring with gxadmin
• beginnerGalaxy Server administration ansible git-gat monitoring -
hands-on tutorial
Galaxy Monitoring with Telegraf and Grafana
• beginnerGalaxy Server administration ansible git-gat monitoring -
hands-on tutorial
Galaxy Monitoring with Reports
• beginnerGalaxy Server administration ansible broken git-gat monitoring