Training materials
Target audience: Students
and Contributors: Alexandre Cormier or Dr. Roland Schwarz or Erwan Corre or Lucille Delisle or Manimozhiyan Arumugam or Michael Ball or Prof. Marc Streit
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hands-on tutorial
CUT&RUN data analysis
• beginnerEpigenomics Epigenetics -
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
hands-on tutorial
Genome annotation with Funannotate
•• intermediateGenome Annotation eukaryote gmod jbrowse1 -
hands-on tutorial
ATAC-Seq data analysis
• beginnerEpigenomics Epigenetics -
hands-on tutorial
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
hands-on tutorial
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
slides
Introduction to ATAC-Seq data analysis
• beginnerEpigenomics Epigenetics -
slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly
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