Training materials
Contributors: Alexandre Cormier or Christopher Barnett or Gautier Sarah or Marius van den Beek or Nicola Soranzo or Pinar Alper or Simon Gladman or Sundeep Agarwal
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hands-on tutorial
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
hands-on tutorial
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
hands-on tutorial
An Introduction to Genome Assembly
• beginnerSequence assembly Assembly -
hands-on tutorial
De Bruijn Graph Assembly
• beginnerSequence assembly Assembly -
hands-on tutorial
Single-cell quality control with scater
• beginnerTranscriptomics Single Cell -
hands-on tutorial
Hands-on for 'Use Singularity containers for running Galaxy jobs' tutorial
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hands-on tutorial
Galaxy Interactive Tools
• beginnerGalaxy Server administration ansible interactive-tools -
hands-on tutorial
Performant Uploads with TUS
• beginnerGalaxy Server administration -
hands-on tutorial
Reference Data with CVMFS without Ansible
• beginnerGalaxy Server administration -
hands-on tutorial
Upgrading Galaxy
• beginnerGalaxy Server administration ansible