Training materials
Difficulty level: Beginner
and Contributors: Alexandre Cormier or Chris Evelo or Célia Michotey or David Bouyssié or Erik van Nimwegen or Florian Christoph Sigloch
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e-learning
ISMARA: A tool to infer genome-wide regulatory interactions
• beginnerSystems biology Gene regulation Transcription factors and regulatory sites Computational modelling -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Label-free versus Labelled - How to Choose Your Quantitation Method' tutorial
• beginnerproteomics DDA -
hands-on tutorial
Hands-on for 'Peptide and Protein ID using SearchGUI and PeptideShaker' tutorial
• beginnerproteomics DDA HeLa -
hands-on tutorial
Hands-on for 'Protein FASTA Database Handling' tutorial
• beginnerproteomics DDA -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
Video, Slides
Plant Phenotyping Data managment Webinar (MIAPPE)
• beginnerPlant biology Phenomics Data quality management Data submission, annotation, and curation Standardisation and normalisation -
A network biology workflow to study transcriptomics data of the diabetic liver
• beginnerBiological networks Network Visualization