Training materials
Difficulty level: Beginner
and Contributors: Alexandre Cormier or Andrea Argentini or Collins Assisi or Cristóbal Gallardo or Dr. Steve Jupe or Martin Čech or Sergio Martínez Cuesta
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slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Visualisation with Circos
• beginnerVisualisation -
hands-on tutorial
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
hands-on tutorial
Galaxy Webhooks
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Analysis of plant scRNA-Seq Data with Scanpy
• beginnerTranscriptomics Single Cell paper-replication plants -
hands-on tutorial
Galaxy Tool Management with Ephemeris
• beginnerGalaxy Server administration git-gat tools -
hands-on tutorial
Understanding Galaxy history system
• beginnerUsing Galaxy and Managing your Data -
hands-on tutorial
Introduction to Genomics and Galaxy
• beginnerIntroduction to Galaxy Analyses -
slides
Galaxy Webhooks
• beginnerSoftware engineering Development in Galaxy -
slides
Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads
• beginnerSequence assembly Assembly covid19
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